Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione import atp-binding protein gsia | SHLA_78c000230 | Not Available | - | 286987 - 288792 | 65066.1 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | SHLA_78c000240 | Not Available | - | 288795 - 289655 | 30539.6 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | SHLA_78c000250 | Not Available | - | 289652 - 290602 | 33587.4 |
| abc transporter substrate binding protein | SHLA_78c000260 | Not Available | - | 290613 - 292130 | 55580.6 |
| molybdenum cofactor biosynthesis protein a | SHLA_123c000010 | Not Available | - | 292329 - 293375 | 38819.8 |
| hypothetical protein | SHLA_123c000020 | Not Available | + | 293516 - 293890 | 13824.4 |
| glutathione-regulated potassium-efflux system protein | SHLA_123c000030 | Not Available | + | 293948 - 295774 | 64437.5 |
| hypothetical protein | SHLA_123c000040 | Not Available | + | 295848 - 296414 | 20813.1 |
| low temperature requirement a | SHLA_123c000050 | Not Available | + | 296432 - 297643 | 43656.8 |
| putative marr family transcriptional regulator | SHLA_123c000060 | Not Available | - | 297640 - 298110 | 17773.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.