Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase | SHLA_2c002240 | Not Available | + | 232006 - 233040 | 39799.8 |
| moce-like protein | SHLA_2c002250 | Not Available | + | 233037 - 233348 | 11304.4 |
| putative rhizopine-binding protein mocb | SHLA_2c002260 | Not Available | + | 233425 - 234369 | 32705.7 |
| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--nad(+) reductase component hcad | SHLA_2c002270 | Not Available | + | 234419 - 235624 | 41834.2 |
| hypothetical protein | SHLA_2c002280 | Not Available | + | 235624 - 236472 | 32233.3 |
| inosine-5'-monophosphate dehydrogenase-like protein | SHLA_2c002290 | Not Available | - | 236741 - 237112 | 13738.6 |
| hypothetical protein duf982 | SHLA_2c002300 | Not Available | - | 237414 - 237680 | 9719.48 |
| inosine-5'-monophosphate dehydrogenase-like protein | SHLA_2c002310 | Not Available | - | 237677 - 238069 | 13529.5 |
| hypothetical protein | SHLA_2c002320 | Not Available | - | 238083 - 238289 | 7795.42 |
| blue-light-activated protein | SHLA_2c002330 | Not Available | + | 238580 - 242305 | 135948.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.