Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| autoinducer 2 kinase lsrk | SHLA_2c001740 | Not Available | + | 182072 - 183634 | 55693.1 |
| hypothetical protein | SHLA_2c001750 | Not Available | + | 183673 - 183978 | 11838.0 |
| pyrroline-5-carboxylate reductase | SHLA_2c001760 | Not Available | - | 184009 - 184791 | 27565.3 |
| putative transcriptional regulator protein | SHLA_2c001770 | Not Available | - | 184794 - 185513 | 27076.4 |
| abc-type amino acid transport system periplasmic component | SHLA_2c001780 | Not Available | + | 185714 - 186544 | 29330.9 |
| glutamate transport atp-binding protein glua | SHLA_2c001790 | Not Available | + | 186604 - 187377 | 27868.4 |
| polar amino acid abc transporter inner membrane subunit | SHLA_2c001800 | Not Available | + | 187389 - 188057 | 24476.6 |
| amine acid abc transporter, permease protein his/glu/gln/arg/opine family | SHLA_2c001810 | Not Available | + | 188069 - 188734 | 23906.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase dapa | SHLA_2c001820 | Not Available | + | 188767 - 189645 | 32318.8 |
| d-amino acid dehydrogenase small subunit | SHLA_2c001830 | Not Available | + | 189703 - 190935 | 44949.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.