Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase b chain | SHLA_2c001640 | Not Available | + | 169591 - 172098 | 87542.5 |
| hypothetical protein | SHLA_2c001650 | Not Available | - | 172179 - 173189 | 35418.5 |
| hypothetical protein | SHLA_2c001660 | Not Available | - | 173201 - 174205 | 35515.4 |
| tetr family transcriptional regulator | SHLA_2c001670 | Not Available | + | 174331 - 174939 | 21707.2 |
| oxidoreductase protein | SHLA_2c001680 | Not Available | - | 174989 - 176242 | 45498.2 |
| autoinducer 2-binding protein lsrb | SHLA_2c001690 | Not Available | - | 176310 - 177341 | 36487.3 |
| autoinducer 2 import system permease protein lsrd | SHLA_2c001700 | Not Available | - | 177344 - 178357 | 34357.8 |
| autoinducer 2 import system permease protein lsrc | SHLA_2c001710 | Not Available | - | 178354 - 179385 | 35497.4 |
| autoinducer 2 import atp-binding protein lsra | SHLA_2c001720 | Not Available | - | 179378 - 180880 | 53787.1 |
| transcriptional regulator lsrr | SHLA_2c001730 | Not Available | + | 181121 - 182068 | 34255.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.