Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydantoin utilization protein a | SHLA_2c001340 | Not Available | + | 141588 - 143618 | 73170.3 |
| hydantoin utilization protein hyub | SHLA_2c001350 | Not Available | + | 143630 - 145327 | 61055.9 |
| hypothetical protein | SHLA_2c001360 | Not Available | + | 145332 - 145523 | 7036.34 |
| 4-aminobutyrate aminotransferase gabt | SHLA_2c001370 | Not Available | + | 145620 - 146924 | 46865.4 |
| succinate-semialdehyde dehydrogenase gabd | SHLA_2c001380 | Not Available | + | 146921 - 148375 | 52079.8 |
| short-chain dehydrogenase/reductase sdr | SHLA_2c001390 | Not Available | + | 148380 - 149078 | 24295.4 |
| hypothetical protein | SHLA_2c001400 | Not Available | - | 148913 - 149488 | 21256.7 |
| curved dna-binding protein cbpa | SHLA_2c001410 | Not Available | + | 149566 - 150468 | 32149.9 |
| merr hth family regulatory protein | SHLA_2c001420 | Not Available | + | 150471 - 150752 | 10557.9 |
| hypothetical protein | SHLA_2c001430 | Not Available | + | 151121 - 151375 | 9168.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.