Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| autoinducer 2 import system permease protein lsrc | SHLA_2c001240 | Not Available | + | 131236 - 132213 | 33299.3 |
| ribose/xylose/arabinose/galactoside abc-type transport system permease component | SHLA_2c001250 | Not Available | + | 132210 - 133166 | 32874.1 |
| acetylornithine deacetylase | SHLA_2c001260 | Not Available | + | 133169 - 134485 | 47281.7 |
| l-2-hydroxyglutarate oxidase lhgo | SHLA_2c001270 | Not Available | - | 134668 - 135855 | 43248.6 |
| abc-type branched-chain amino acid transport system atpase component | SHLA_2c001280 | Not Available | - | 135940 - 136668 | 26004.7 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SHLA_2c001290 | Not Available | + | 136832 - 138028 | 42609.9 |
| high-affinity branched-chain amino acid transport atp-binding protein livg | SHLA_2c001300 | Not Available | + | 138125 - 138880 | 26757.5 |
| high-affinity branched-chain amino acid transport system permease protein livh | SHLA_2c001310 | Not Available | + | 138893 - 139807 | 31660.6 |
| putative branched-chain amino acid abc transporter, permease protein | SHLA_2c001320 | Not Available | + | 139807 - 140865 | 37115.6 |
| transcriptional regulator, gntr family | SHLA_2c001330 | Not Available | + | 140858 - 141562 | 26853.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.