Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase-o major subunit | SHLA_2c001140 | Not Available | - | 120353 - 120952 | 21299.2 |
| selenide, water dikinase seld | SHLA_2c001150 | Not Available | + | 121124 - 122179 | 35587.0 |
| pas/pac sensor-containing diguanylate cyclase/phosphodiesterase | SHLA_2c001160 | Not Available | - | 122332 - 124620 | 84045.7 |
| crp/fnr family transcriptional regulator | SHLA_2c001170 | Not Available | + | 124764 - 125444 | 24917.0 |
| chemoreceptor mcpa | SHLA_2c001180 | Not Available | - | 125498 - 126994 | 52725.7 |
| hypothetical protein | SHLA_2c001190 | Not Available | - | 127070 - 127225 | 5634.87 |
| sugar kinase, ribokinase family | SHLA_2c001200 | Not Available | + | 127412 - 128590 | 41390.9 |
| hypothetical protein | SHLA_2c001210 | Not Available | + | 128631 - 129404 | 28022.5 |
| ribose import atp-binding protein rbsa 2 | SHLA_2c001220 | Not Available | + | 129426 - 130199 | 27726.5 |
| autoinducer 2-binding protein lsrb | SHLA_2c001230 | Not Available | + | 130231 - 131217 | 34027.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.