Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase fold protein | SHLA_2c001040 | Not Available | + | 109304 - 110107 | 28006.6 |
| ribulose-phosphate 3-epimerase rpe | SHLA_2c001050 | Not Available | + | 110111 - 110812 | 25350.8 |
| glucokinase glck | SHLA_2c001060 | Not Available | + | 110794 - 111825 | 35705.0 |
| Trna-sec(p) | Not Available | Not Available | + | 111830 - 111921 | Not Available |
| selenocysteine-specific elongation factor selb | SHLA_2c001080 | Not Available | - | 111977 - 113881 | 67392.5 |
| l-seryl-trna(sec) selenium transferase sela | SHLA_2c001090 | Not Available | - | 113878 - 115254 | 48136.3 |
| formate dehydrogenase accessory protein fdhe | SHLA_2c001100 | Not Available | - | 115254 - 116165 | 32196.0 |
| formate dehydrogenase, cytochrome b556 subunit | SHLA_2c001110 | Not Available | - | 116197 - 116886 | 26052.4 |
| formate dehydrogenase-o iron-sulfur subunit | SHLA_2c001120 | Not Available | - | 116886 - 117872 | 34941.5 |
| formate dehydrogenase-o major subunit | SHLA_2c001130 | Not Available | - | 117869 - 120304 | 91215.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.