Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | SHLA_2c000640 | Not Available | + | 67409 - 68308 | 33171.0 |
| protocatechuate 3,4-dioxygenase beta subunit | SHLA_2c000650 | Not Available | - | 68421 - 69320 | 33952.3 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SHLA_2c000660 | Not Available | - | 69329 - 71083 | 63704.6 |
| abc-type branched-chain amino acid transport system permease component | SHLA_2c000670 | Not Available | - | 71076 - 72158 | 38238.8 |
| branched-chain amino acid abc-type transport system permease component | SHLA_2c000680 | Not Available | - | 72168 - 73031 | 29820.8 |
| abc-type branched-chain amino acid transport system atpase component | SHLA_2c000690 | Not Available | - | 73018 - 73737 | 25592.2 |
| abc-type branched-chain amino acid transport system atpase component | SHLA_2c000700 | Not Available | - | 73734 - 74453 | 25423.1 |
| abc-type branched-chain amino acid transport system periplasmic component | SHLA_2c000710 | Not Available | - | 74504 - 75784 | 44958.1 |
| alcohol dehydrogenase, class iv | SHLA_2c000720 | Not Available | - | 75827 - 76885 | 36796.1 |
| protocatechuate 3,4-dioxygenase beta subunit | SHLA_2c000730 | Not Available | - | 76882 - 77736 | 31027.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.