Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative aldehyde dehydrogenase dhas | SHLA_2c000540 | Not Available | - | 57939 - 59438 | 52888.4 |
| antibiotic biosynthesis monooxygenase | SHLA_2c000550 | Not Available | - | 59464 - 59763 | 10961.1 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | SHLA_2c000560 | Not Available | - | 59794 - 60507 | 25261.1 |
| high-affinity branched-chain amino acid transport atp-binding protein braf | SHLA_2c000570 | Not Available | - | 60497 - 61219 | 26480.1 |
| abc-type branched-chain amino acid transport system permease component | SHLA_2c000580 | Not Available | - | 61216 - 62253 | 36174.5 |
| branched-chain amino acid abc-type transport system permease component | SHLA_2c000590 | Not Available | - | 62250 - 63116 | 29861.8 |
| abc-type branched-chain amino acid transport system periplasmic component | SHLA_2c000600 | Not Available | - | 63182 - 64399 | 43905.8 |
| abc-type branched-chain amino acid transport system periplasmic component | SHLA_2c000610 | Not Available | - | 64706 - 65776 | 38680.9 |
| regulatory protein marr | SHLA_2c000620 | Not Available | + | 66056 - 66472 | 15638.0 |
| nicotinamidase-like amidase | SHLA_2c000630 | Not Available | - | 66563 - 67252 | 25457.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.