Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, permease, fe3+-siderophore transport system | SHLA_2c000340 | Not Available | - | 34765 - 35805 | 34990.9 |
| iron abc transporter periplasmic solute-binding protein | SHLA_2c000350 | Not Available | - | 35802 - 36794 | 34996.8 |
| ferrichrome-iron receptor | SHLA_2c000360 | Not Available | + | 36995 - 39214 | 81301.9 |
| dna-binding protein, arac-type | SHLA_2c000370 | Not Available | - | 39221 - 40114 | 32779.4 |
| abc-type antimicrobial peptide transport system, permease component | SHLA_2c000380 | Not Available | - | 40339 - 41550 | 42104.1 |
| abc-type transport system, involved in lipoprotein release, permease component | SHLA_2c000390 | Not Available | - | 41556 - 42698 | 40319.7 |
| abc-type antimicrobial peptide transport system, atpase component | SHLA_2c000400 | Not Available | - | 42698 - 43399 | 25628.3 |
| putative auxiliary transport protein, mfp family | SHLA_2c000410 | Not Available | - | 43396 - 44499 | 38910.8 |
| glyoxalase protein | SHLA_2c000420 | Not Available | + | 44716 - 45120 | 15236.0 |
| xylulose kinase xylb | SHLA_2c000430 | Not Available | - | 45139 - 46650 | 53163.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.