Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_60c000210 | Not Available | + | 1308326 - 1308685 | 13254.7 |
| atp-dependent clp protease proteolytic subunit 1 | SHLA_60c000220 | Not Available | + | 1308729 - 1309352 | 23378.4 |
| putative transcriptional regulator protein | SHLA_60c000230 | Not Available | - | 1309387 - 1310073 | 26008.8 |
| permease of the drug/metabolite transporter (dmt) superfamily | SHLA_60c000240 | Not Available | + | 1310152 - 1311036 | 31749.8 |
| atp synthase, f0 subunit b | SHLA_60c000250 | Not Available | - | 1311112 - 1311597 | 17425.9 |
| f0f1-type atp synthase, subunit b | SHLA_60c000260 | Not Available | - | 1311608 - 1312261 | 22558.4 |
| atp synthase f0 subcomplex c subunit | SHLA_60c000270 | Not Available | - | 1312349 - 1312576 | 7593.37 |
| f0f1-type atp synthase, subunit a | SHLA_60c000280 | Not Available | - | 1312643 - 1313395 | 26786.6 |
| atp synthase subunit i | SHLA_60c000290 | Not Available | - | 1313457 - 1313852 | 13784.5 |
| cell wall hydrolase | SHLA_60c000300 | Not Available | - | 1314113 - 1315303 | 43533.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.