Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type sugar transport system, periplasmic component | SHLA_32c000840 | Not Available | + | 1271504 - 1272535 | 37552.4 |
| xylose isomerase domain-containing protein | SHLA_32c000850 | Not Available | + | 1272701 - 1273513 | 28705.6 |
| putative rhizopine-binding protein mocb | SHLA_32c000860 | Not Available | + | 1273771 - 1274700 | 32773.9 |
| cytochrome c biogenesis atp-binding export protein ccma | SHLA_102c000020 | Not Available | + | 1274893 - 1275537 | 22509.3 |
| heme exporter protein b | SHLA_102c000030 | Not Available | + | 1275534 - 1276193 | 22587.7 |
| heme exporter protein c | SHLA_102c000040 | Not Available | + | 1276267 - 1277037 | 28459.4 |
| heme exporter protein ccmd | SHLA_102c000050 | Not Available | + | 1277034 - 1277201 | 6186.35 |
| thiol:disulfide interchange protein cycy | SHLA_102c000060 | Not Available | + | 1277198 - 1277812 | 21777.3 |
| peptidyl-dipeptidase dcp | SHLA_102c000070 | Not Available | - | 1277858 - 1279918 | 76002.0 |
| hypothetical protein | SHLA_102c000080 | Not Available | + | 1280209 - 1280304 | 3603.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.