Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xylose transport system permease protein xylh | SHLA_32c000740 | Not Available | - | 1261710 - 1262918 | 42982.1 |
| abc-type sugar transport system atpase component | SHLA_32c000750 | Not Available | - | 1262918 - 1264453 | 56590.8 |
| abc-type xylose transport system periplasmic component | SHLA_32c000760 | Not Available | - | 1264575 - 1265648 | 38210.4 |
| hth-type transcriptional regulator gbpr | SHLA_32c000770 | Not Available | + | 1265905 - 1266912 | 36131.1 |
| hypothetical protein | SHLA_32c000780 | Not Available | + | 1266924 - 1267427 | 18063.4 |
| hypothetical protein | SHLA_32c000790 | Not Available | - | 1267540 - 1267764 | 8502.3 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase panb | SHLA_32c000800 | Not Available | - | 1267826 - 1268620 | 28362.0 |
| anthranilate 1,2-dioxygenase system ferredoxin--nad(+) reductase component | SHLA_32c000810 | Not Available | - | 1268640 - 1269863 | 42326.1 |
| rieske (2fe-2s) domain-containing protein, moce subfamily | SHLA_32c000820 | Not Available | - | 1269916 - 1270230 | 11569.6 |
| fatty acid desaturase | SHLA_32c000830 | Not Available | - | 1270256 - 1271341 | 41088.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.