Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| guanine deaminase guad | SHLA_32c000540 | Not Available | + | 1237501 - 1238808 | 48127.5 |
| 5-hydroxyisourate hydrolase 2 | SHLA_32c000550 | Not Available | - | 1238855 - 1239217 | 12991.4 |
| ureidoglycolate hydrolase 1 | SHLA_32c000560 | Not Available | - | 1239225 - 1239719 | 18434.8 |
| 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | SHLA_32c000570 | Not Available | - | 1239771 - 1240268 | 17675.2 |
| putative urate catabolism protein | SHLA_32c000580 | Not Available | - | 1240265 - 1241197 | 35078.5 |
| prc-barrel protein | SHLA_32c000590 | Not Available | + | 1241332 - 1241706 | 14040.3 |
| oxidoreductase | SHLA_32c000600 | Not Available | - | 1241714 - 1242817 | 38184.3 |
| trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmc | SHLA_32c000610 | Not Available | + | 1242891 - 1243613 | 26662.3 |
| sensor protein gacs | SHLA_32c000620 | Not Available | - | 1243618 - 1247277 | 132018.0 |
| trimethylamine methyltransferase mttb | SHLA_32c000630 | Not Available | + | 1247471 - 1249120 | 59887.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.