Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor, sigma-70 family | SHLA_32c000440 | Not Available | - | 1228342 - 1229598 | 46230.8 |
| hypothetical protein | SHLA_32c000450 | Not Available | - | 1229595 - 1229969 | 13523.1 |
| hypothetical protein | SHLA_32c000460 | Not Available | + | 1230065 - 1231012 | 34631.0 |
| hypothetical protein | SHLA_32c000470 | Not Available | - | 1231054 - 1231458 | 15491.5 |
| glycerol kinase glpk | SHLA_32c000480 | Not Available | - | 1231536 - 1233029 | 54427.9 |
| d-beta-hydroxybutyrate dehydrogenase bdha | SHLA_32c000490 | Not Available | + | 1233226 - 1233999 | 27311.8 |
| xanthine dehydrogenase accessory protein xdhc | SHLA_32c000500 | Not Available | + | 1234133 - 1234969 | 29907.8 |
| hypothetical protein | SHLA_32c000510 | Not Available | - | 1234966 - 1235145 | 7118.71 |
| glycine cleavage system transcriptional activator | SHLA_32c000520 | Not Available | + | 1235253 - 1236140 | 32802.4 |
| hypothetical protein | SHLA_32c000530 | Not Available | + | 1236263 - 1237495 | 45637.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.