Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| raf kinase inhibitor-like protein, ybhb/ybcl family | SHLA_32c000340 | Not Available | + | 1218746 - 1219297 | 18667.2 |
| dna-binding helix-turn-helix protein | SHLA_32c000350 | Not Available | + | 1219354 - 1220220 | 31564.9 |
| gtpase der | SHLA_32c000360 | Not Available | - | 1220171 - 1221604 | 52769.2 |
| hypothetical protein | SHLA_32c000370 | Not Available | - | 1221696 - 1222367 | 24101.4 |
| putative membrane protein | SHLA_32c000380 | Not Available | - | 1222469 - 1223053 | 20964.9 |
| hypothetical protein | SHLA_32c000390 | Not Available | + | 1223193 - 1224206 | 37045.8 |
| microcin b17 transporter | SHLA_32c000400 | Not Available | - | 1224216 - 1225481 | 48398.8 |
| methionine aminopeptidase map | SHLA_32c000410 | Not Available | - | 1225789 - 1226541 | 26817.8 |
| putative oxidoreductase protein | SHLA_32c000420 | Not Available | - | 1226587 - 1227648 | 38023.4 |
| hypothetical protein | SHLA_32c000430 | Not Available | - | 1227780 - 1228262 | 18177.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.