Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_32c000140 | Not Available | - | 1197034 - 1198944 | 69760.9 |
| hypothetical protein | SHLA_32c000150 | Not Available | - | 1199056 - 1200204 | 42418.6 |
| hypothetical protein | SHLA_32c000160 | Not Available | - | 1200395 - 1201483 | 41047.9 |
| cytochrome c2 | SHLA_32c000170 | Not Available | - | 1201657 - 1202034 | 13245.3 |
| thymidine kinase tdk | SHLA_32c000180 | Not Available | - | 1202064 - 1202651 | 21658.8 |
| glycine betaine abc transporter substrate-binding protein | SHLA_32c000190 | Not Available | + | 1202881 - 1203840 | 33900.2 |
| glycine betaine transport system permease protein opuab | SHLA_32c000200 | Not Available | + | 1203991 - 1204863 | 30858.9 |
| glycine betaine/l-proline transport atp-binding protein prov | SHLA_32c000210 | Not Available | + | 1204860 - 1205900 | 37085.0 |
| pyridoxamine 5'-phosphate oxidase | SHLA_32c000220 | Not Available | + | 1205980 - 1206744 | 27592.8 |
| nodulation repressor nolr | SHLA_32c000230 | Not Available | + | 1206928 - 1207266 | 12209.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.