Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative metalloendopeptidase | SHLA_71c000010 | Not Available | + | 1147278 - 1149302 | 72831.6 |
| sira family protein | SHLA_71c000020 | Not Available | - | 1149400 - 1149648 | 9087.0 |
| hypothetical protein | SHLA_71c000030 | Not Available | - | 1149645 - 1151147 | 55220.5 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit alpha | SHLA_71c000040 | Not Available | - | 1151340 - 1152293 | 34777.5 |
| tyrosine recombinase xerd | SHLA_71c000050 | Not Available | - | 1152370 - 1153317 | 34640.7 |
| hypothetical protein | SHLA_71c000060 | Not Available | - | 1153314 - 1153463 | 5552.83 |
| shikimate kinase arok | SHLA_71c000070 | Not Available | + | 1153617 - 1154210 | 21724.5 |
| 3-dehydroquinate synthase arob | SHLA_71c000080 | Not Available | + | 1154221 - 1155354 | 39861.0 |
| hypothetical protein upf0053 | SHLA_71c000090 | Not Available | + | 1155351 - 1156271 | 34216.2 |
| hypothetical protein | SHLA_71c000100 | Not Available | - | 1156272 - 1156553 | 10078.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.