Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mn2+-dependent serine/threonine protein kinase | SHLA_35c000750 | Not Available | - | 1127658 - 1128521 | 31566.4 |
| 50s ribosomal protein l20 | SHLA_35c000760 | Not Available | - | 1128623 - 1129027 | 15031.2 |
| ribosomal protein l35 | SHLA_35c000770 | Not Available | - | 1129067 - 1129270 | 7357.33 |
| translation initiation factor if-3 | SHLA_35c000780 | Not Available | - | 1129489 - 1130160 | 25236.7 |
| putative hydrolase protein | SHLA_35c000790 | Not Available | + | 1130258 - 1131076 | 28646.2 |
| hypothetical protein | SHLA_35c000800 | Not Available | + | 1131185 - 1131802 | 22148.4 |
| acetyltransferase ttr | SHLA_35c000810 | Not Available | - | 1131896 - 1132432 | 19114.9 |
| putative transcriptional regulator protein, laci family | SHLA_35c000820 | Not Available | - | 1132447 - 1133031 | 21046.2 |
| major facilitator superfamily mfs-1 | SHLA_35c000830 | Not Available | + | 1133168 - 1134418 | 44027.4 |
| elongation factor 4 | SHLA_35c000840 | Not Available | + | 1134480 - 1136312 | 67501.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.