Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SHLA_35c000650 | Not Available | - | 1117549 - 1118367 | 29562.5 |
| hypothetical protein | SHLA_35c000660 | Not Available | + | 1118449 - 1118859 | 13678.3 |
| acetylpolyamine aminohydrolase apha | SHLA_35c000670 | Not Available | + | 1119013 - 1120038 | 36278.9 |
| inner membrane transporter rhta | SHLA_35c000680 | Not Available | + | 1120181 - 1121071 | 30113.8 |
| hypothetical protein | SHLA_35c000690 | Not Available | + | 1121150 - 1121812 | 23019.6 |
| hypothetical protein | SHLA_35c000700 | Not Available | - | 1121840 - 1122664 | 30840.2 |
| hypothetical protein | SHLA_35c000710 | Not Available | + | 1122886 - 1123869 | 35976.1 |
| hypothetical protein | SHLA_35c000720 | Not Available | - | 1123884 - 1123988 | 3867.85 |
| phenylalanine--trna ligase beta subunit | SHLA_35c000730 | Not Available | - | 1124133 - 1126559 | 85697.9 |
| phenylalanine--trna ligase alpha subunit | SHLA_35c000740 | Not Available | - | 1126583 - 1127665 | 39996.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.