Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase t | SHLA_35c000550 | Not Available | + | 1107728 - 1108981 | 44593.6 |
| pyrroline-5-carboxylate reductase | SHLA_35c000560 | Not Available | + | 1108978 - 1109766 | 28037.5 |
| putative permease, dmt superfamily | SHLA_35c000570 | Not Available | - | 1109717 - 1110631 | 31697.8 |
| hth-type transcriptional regulator pecs | SHLA_35c000580 | Not Available | + | 1110694 - 1111197 | 18523.5 |
| nad(p)h dehydrogenase | SHLA_35c000590 | Not Available | - | 1111257 - 1111847 | 22171.8 |
| exodeoxyribonuclease 7 large subunit | SHLA_35c000600 | Not Available | - | 1111855 - 1113441 | 57321.0 |
| hypothetical protein | SHLA_35c000610 | Not Available | - | 1113522 - 1115351 | 63975.6 |
| glycosyltransferase aglj | SHLA_35c000620 | Not Available | + | 1115481 - 1116455 | 35924.4 |
| methylase involved in ubiquinone/menaquinone biosynthesis | SHLA_35c000630 | Not Available | + | 1116473 - 1117180 | 26698.0 |
| eama-like transporter family | SHLA_35c000640 | Not Available | + | 1117177 - 1117542 | 12608.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.