Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chloramphenicol resistance protein cmla | SHLA_35c000150 | Not Available | + | 1070411 - 1071604 | 41454.0 |
| putative methylated-dna-[protein]-cysteine s-methyltransferase protein | SHLA_35c000160 | Not Available | - | 1071644 - 1072204 | 19293.9 |
| putative succinylglutamate desuccinylase/aspartoacylase | SHLA_35c000170 | Not Available | + | 1072360 - 1073418 | 38258.3 |
| cardiolipin synthase cls | SHLA_35c000180 | Not Available | + | 1073586 - 1075046 | 52968.2 |
| endonuclease/exonuclease/phosphatase | SHLA_35c000190 | Not Available | - | 1075018 - 1075866 | 30985.5 |
| leucine-responsive regulatory protein lrp | SHLA_35c000200 | Not Available | - | 1075953 - 1076432 | 17889.8 |
| tyrosine aminotransferase tata | SHLA_35c000210 | Not Available | + | 1076581 - 1077750 | 41487.1 |
| putative transmembrane protein | SHLA_35c000220 | Not Available | + | 1077758 - 1078378 | 22111.5 |
| transcriptional regulator, spx/mgsr family | SHLA_35c000230 | Not Available | + | 1078458 - 1078802 | 12663.3 |
| transcriptional regulator, arac family | SHLA_35c000240 | Not Available | - | 1078806 - 1079705 | 32278.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.