Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_137c000010 | Not Available | - | 1052862 - 1053362 | 19531.4 |
| hypothetical protein | SHLA_137c000020 | Not Available | - | 1053359 - 1053925 | 21728.4 |
| hypothetical protein | SHLA_137c000030 | Not Available | - | 1053934 - 1054122 | 6454.74 |
| transposase | SHLA_137c000040 | Not Available | - | 1054675 - 1054884 | 7625.21 |
| hypothetical protein | SHLA_137c000050 | Not Available | + | 1055100 - 1055237 | 4878.86 |
| hypothetical protein | SHLA_137c000060 | Not Available | - | 1055604 - 1055705 | 3721.35 |
| plasmid and phage iteron-binding protein | SHLA_35c000010 | Not Available | + | 1057510 - 1058391 | 32824.9 |
| p-type conjugative transfer protein trbj | SHLA_35c000020 | Not Available | + | 1059753 - 1060532 | 28269.3 |
| entry exclusion lipoprotein trbk | SHLA_35c000030 | Not Available | + | 1060545 - 1060781 | 8950.63 |
| p-type conjugative transfer protein trbl | SHLA_35c000040 | Not Available | + | 1060822 - 1062219 | 47341.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.