Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative methyltransferase | SHLA_86c000130 | Not Available | + | 1044660 - 1045475 | 29594.8 |
| nad-binding 6-phosphogluconate dehydrogenase | SHLA_86c000140 | Not Available | + | 1045544 - 1046416 | 30638.9 |
| hypothetical protein | SHLA_86c000150 | Not Available | + | 1046418 - 1046792 | 12808.5 |
| asnc family transcriptional regulator | SHLA_86c000160 | Not Available | - | 1046821 - 1047309 | 18855.0 |
| uracil-dna glycosylase protein | SHLA_86c000170 | Not Available | - | 1047376 - 1048014 | 23650.3 |
| hypothetical protein | SHLA_86c000180 | Not Available | - | 1048108 - 1048422 | 11488.6 |
| nuclease | SHLA_86c000190 | Not Available | - | 1048721 - 1049284 | 20123.0 |
| non-motile and phage-resistance protein plec | SHLA_86c000200 | Not Available | + | 1049554 - 1051089 | 55228.3 |
| diacylglycerol kinase dgka | SHLA_86c000210 | Not Available | - | 1051131 - 1051508 | 13442.6 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase cobu | SHLA_86c000220 | Not Available | - | 1051610 - 1052626 | 34838.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.