Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor guanylyltransferase moba | SHLA_86c000030 | Not Available | + | 1033833 - 1034468 | 23020.5 |
| molybdopterin-guanine dinucleotide biosynthesis adapter protein mobb | SHLA_86c000040 | Not Available | + | 1034465 - 1034989 | 18934.8 |
| histidyl-trna synthetase | SHLA_86c000050 | Not Available | + | 1035208 - 1035960 | 29159.7 |
| ompa family protein | SHLA_86c000060 | Not Available | - | 1036016 - 1038178 | 86833.9 |
| ompa/motb domain-containing protein | SHLA_86c000070 | Not Available | - | 1038363 - 1040453 | 76820.8 |
| amino acid abc transporter substrate-binding protein, paat family | SHLA_86c000080 | Not Available | + | 1040793 - 1041575 | 27882.1 |
| amine acid abc transporter, permease protein his/glu/gln/arg/opine family | SHLA_86c000090 | Not Available | + | 1041745 - 1042548 | 28623.7 |
| amine acid abc transporter, permease protein his/glu/gln/arg/opine family | SHLA_86c000100 | Not Available | + | 1042545 - 1043375 | 30971.5 |
| protein usg | SHLA_86c000110 | Not Available | + | 1043520 - 1043786 | 10515.8 |
| putative transmembrane protein | SHLA_86c000120 | Not Available | - | 1043800 - 1044528 | 27246.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.