Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type multidrug transport system, atpase component | SHLA_80c000060 | Not Available | - | 1006888 - 1007814 | 33381.5 |
| putative permease | SHLA_80c000070 | Not Available | - | 1007907 - 1008728 | 28482.8 |
| hypothetical protein | SHLA_80c000080 | Not Available | - | 1009097 - 1010311 | 43230.8 |
| chemoreceptor mcpa | SHLA_80c000090 | Not Available | - | 1010684 - 1012504 | 65064.0 |
| thioesterase superfamily protein | SHLA_80c000100 | Not Available | + | 1012714 - 1013100 | 13624.5 |
| hypothetical protein | SHLA_80c000110 | Not Available | - | 1013162 - 1014334 | 41555.6 |
| hypothetical protein | SHLA_80c000120 | Not Available | - | 1014343 - 1015815 | 53340.3 |
| putative transmembrane signal peptide protein | SHLA_80c000130 | Not Available | - | 1015877 - 1016230 | 12965.1 |
| nad(p)h dehydrogenase | SHLA_80c000140 | Not Available | - | 1016360 - 1016947 | 21385.7 |
| hth-type transcriptional activator nahr | SHLA_80c000150 | Not Available | + | 1017036 - 1017962 | 32948.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.