Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_97c000100 | Not Available | - | 996991 - 997653 | 24116.1 |
| hypothetical protein | SHLA_97c000110 | Not Available | + | 998022 - 998552 | 19768.8 |
| acid tolerance regulatory protein actr | SHLA_97c000120 | Not Available | - | 998716 - 999285 | 20874.0 |
| sensor histidine kinase regb | SHLA_97c000130 | Not Available | - | 999363 - 1000664 | 47323.6 |
| atp-dependent rna helicase hrpb | SHLA_97c000140 | Not Available | - | 1000886 - 1003354 | 88488.7 |
| cobalamin synthase cobv | SHLA_80c000010 | Not Available | + | 1003790 - 1004572 | 26242.4 |
| putative fe-s protein | SHLA_80c000020 | Not Available | + | 1004610 - 1004831 | 8383.17 |
| clan aa aspartic protease, tigr02281 family | SHLA_80c000030 | Not Available | + | 1004828 - 1005526 | 24904.6 |
| hypothetical protein | SHLA_80c000040 | Not Available | + | 1005623 - 1006105 | 18123.2 |
| putative pleiotropic drug resistance protein 7 | SHLA_80c000050 | Not Available | - | 1006130 - 1006891 | 27962.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.