Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transposase | SHLA_23c001040 | Not Available | + | 985370 - 986434 | 38764.3 |
| hypothetical protein | SHLA_97c000010 | Not Available | - | 986509 - 986637 | 4526.51 |
| atp-dependent protease subunit hslv | SHLA_97c000020 | Not Available | + | 986883 - 987443 | 20281.3 |
| gcn5-like n-acetyltransferase | SHLA_97c000030 | Not Available | + | 987430 - 987924 | 18568.0 |
| atp-dependent protease atpase subunit hslu | SHLA_97c000040 | Not Available | + | 987938 - 989248 | 47935.7 |
| hypothetical protein duf1402 | SHLA_97c000050 | Not Available | + | 989424 - 990371 | 34366.6 |
| putative cytochrome p450 132 | SHLA_97c000060 | Not Available | + | 990484 - 991890 | 52896.1 |
| hypothetical protein | SHLA_97c000070 | Not Available | - | 991835 - 992389 | 20626.5 |
| putative hydantoinase/oxoprolinase family protein | SHLA_97c000080 | Not Available | + | 992530 - 994536 | 69948.5 |
| malate synthase g | SHLA_97c000090 | Not Available | + | 994722 - 996884 | 78702.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.