Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_23c000940 | Not Available | - | 975941 - 976267 | 12566.0 |
| spermidine/putrescine-binding periplasmic protein | SHLA_23c000950 | Not Available | - | 976330 - 977364 | 38291.9 |
| abc-type spermidine/putrescine transport system permease component ii | SHLA_23c000960 | Not Available | - | 977391 - 978233 | 30679.5 |
| abc-type spermidine/putrescine transport system permease component i | SHLA_23c000970 | Not Available | - | 978233 - 979138 | 33447.2 |
| spermidine/putrescine abc transporter atp-binding subunit | SHLA_23c000980 | Not Available | - | 979140 - 980249 | 40190.3 |
| l-aminopeptidase dmpa, serine peptidase, merops family s58 | SHLA_23c000990 | Not Available | + | 980383 - 981477 | 38993.2 |
| glutamine synthetase glna | SHLA_23c001000 | Not Available | - | 981478 - 982851 | 50585.2 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | SHLA_23c001010 | Not Available | - | 982939 - 984270 | 48220.1 |
| insertion sequence transposase protein | SHLA_23c001020 | Not Available | + | 984561 - 984959 | 14847.7 |
| putative insertion sequence transposase protein | SHLA_23c001030 | Not Available | + | 984956 - 985303 | 12781.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.