Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deacetyase | SHLA_23c000840 | Not Available | - | 962907 - 964004 | 39268.5 |
| arac-type dna-binding domain-containing protein | SHLA_23c000850 | Not Available | - | 964091 - 965053 | 36470.3 |
| transcriptional regulator | SHLA_23c000860 | Not Available | + | 965233 - 966171 | 36105.2 |
| d-amino acid dehydrogenase 3 small subunit | SHLA_23c000870 | Not Available | + | 966397 - 967644 | 45863.7 |
| succinate semialdehyde dehydrogenase sad | SHLA_23c000880 | Not Available | - | 968100 - 969488 | 49888.2 |
| putative n-formylglutamate amidohydrolase | SHLA_23c000890 | Not Available | + | 970012 - 970800 | 29266.9 |
| amino acid transporter | SHLA_23c000900 | Not Available | + | 970868 - 972193 | 47105.0 |
| reactive intermediate/imine deaminase | SHLA_23c000910 | Not Available | + | 972288 - 972731 | 15442.9 |
| transcriptional regulator gntr family | SHLA_23c000920 | Not Available | - | 972778 - 973650 | 32730.8 |
| glucanase superfamily | SHLA_23c000930 | Not Available | - | 973684 - 975921 | 82283.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.