Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arabinose efflux permease | SHLA_23c000740 | Not Available | - | 951848 - 953065 | 41580.9 |
| putative transcriptional regulator | SHLA_23c000750 | Not Available | - | 953058 - 953426 | 13154.8 |
| hypothetical protein | SHLA_23c000760 | Not Available | + | 953470 - 953988 | 18322.7 |
| acetate--coa ligase | SHLA_23c000770 | Not Available | - | 955263 - 957203 | 71254.2 |
| hypothetical protein | SHLA_23c000780 | Not Available | - | 957226 - 957645 | 13851.7 |
| abc-type dipeptide/oligopeptide/nickel transport system atpase component dppf | SHLA_23c000790 | Not Available | - | 957751 - 958509 | 27184.7 |
| abc-type dipeptide/oligopeptide/nickel transport system atpase component dppd | SHLA_23c000800 | Not Available | - | 958506 - 959459 | 34207.5 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | SHLA_23c000810 | Not Available | - | 959464 - 959991 | 18576.5 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | SHLA_23c000820 | Not Available | - | 960339 - 961289 | 33439.8 |
| abc-type dipeptide transport system periplasmic component | SHLA_23c000830 | Not Available | - | 961303 - 962877 | 56781.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.