Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, substrate binding protein | SHLA_23c000540 | Not Available | - | 935343 - 936329 | 35054.7 |
| manganese transport system membrane protein mntc | SHLA_23c000550 | Not Available | - | 936349 - 937215 | 30287.5 |
| manganese transport system atp-binding protein mntb | SHLA_23c000560 | Not Available | - | 937208 - 938002 | 28668.5 |
| putative gtpase | SHLA_23c000570 | Not Available | + | 938128 - 938310 | 6326.67 |
| putative gtpase | SHLA_23c000580 | Not Available | + | 938310 - 939080 | 29091.2 |
| hypothetical protein | SHLA_23c000590 | Not Available | + | 939077 - 940315 | 44176.3 |
| putative zinc uptake regulation protein | SHLA_23c000600 | Not Available | + | 940445 - 940792 | 12968.7 |
| putative gtpase | SHLA_23c000610 | Not Available | + | 940870 - 942075 | 44849.6 |
| abc-type amino acid transport system periplasmic component | SHLA_23c000620 | Not Available | + | 942125 - 942640 | 18533.1 |
| chloride channel protein | SHLA_23c000630 | Not Available | + | 942920 - 944593 | 58497.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.