Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_23c000340 | Not Available | - | 917844 - 918473 | 21156.4 |
| transcriptional regulator, merr-family | SHLA_23c000350 | Not Available | + | 918551 - 918994 | 16221.7 |
| nmra-like family protein | SHLA_23c000360 | Not Available | - | 919795 - 920652 | 29966.2 |
| methylase involved in ubiquinone/menaquinone biosynthesis | SHLA_23c000370 | Not Available | - | 920786 - 921352 | 20456.7 |
| transcriptional regulator, hxlr family | SHLA_23c000380 | Not Available | + | 921466 - 921855 | 14344.3 |
| hth-type transcriptional regulator cdhr | SHLA_23c000390 | Not Available | - | 921879 - 922856 | 35935.2 |
| nicotinamidase-like protein | SHLA_23c000400 | Not Available | + | 922965 - 923513 | 19387.9 |
| putative thioesterase | SHLA_23c000410 | Not Available | - | 923601 - 924035 | 16187.5 |
| glycine cleavage system transcriptional activator | SHLA_23c000420 | Not Available | + | 924675 - 925595 | 33938.7 |
| histidine transport atp-binding protein hisp | SHLA_23c000430 | Not Available | + | 925799 - 926569 | 27864.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.