Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione import atp-binding protein gsia | SHLA_23c000240 | Not Available | - | 908250 - 909065 | 29654.0 |
| putative peptide abc transporter atp-binding protein y4tr | SHLA_23c000250 | Not Available | - | 909062 - 910828 | 63184.4 |
| abc-type dipeptide/oligopeptide/nickel transport system permease component | SHLA_23c000260 | Not Available | - | 910825 - 911766 | 33157.6 |
| abc-type dipeptide transport system periplasmic component | SHLA_23c000270 | Not Available | - | 911776 - 913299 | 55083.4 |
| transcriptional regulator | SHLA_23c000280 | Not Available | + | 913688 - 914359 | 24711.7 |
| transposase | SHLA_23c000290 | Not Available | + | 914497 - 914763 | 10064.4 |
| insertion element is407 | SHLA_23c000300 | Not Available | + | 914796 - 915500 | 27763.3 |
| putative efflux protein | SHLA_23c000310 | Not Available | - | 915702 - 916655 | 33549.9 |
| putative cytochrome c biogenesis protein | SHLA_23c000320 | Not Available | - | 916752 - 917462 | 24239.8 |
| thioredoxin-like protein | SHLA_23c000330 | Not Available | - | 917464 - 917844 | 13561.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.