Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHLA_23c000040 | Not Available | - | 889563 - 889877 | 10851.4 |
| hypothetical protein | SHLA_23c000050 | Not Available | + | 890456 - 891646 | 44360.7 |
| hypothetical protein | SHLA_23c000060 | Not Available | + | 891738 - 891908 | 6415.8 |
| hypothetical protein | SHLA_23c000070 | Not Available | - | 892307 - 893497 | 44212.3 |
| putative transcriptional regulator | SHLA_23c000080 | Not Available | - | 893598 - 895739 | 79364.0 |
| hypothetical protein | SHLA_23c000090 | Not Available | - | 895840 - 896418 | 21743.2 |
| 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase | SHLA_23c000100 | Not Available | - | 896415 - 897566 | 43344.3 |
| hypothetical protein | SHLA_23c000110 | Not Available | + | 897802 - 898041 | 8957.78 |
| putative ribonuclease vapc | SHLA_23c000120 | Not Available | + | 898041 - 898484 | 16434.6 |
| uvrd/rep helicase | SHLA_23c000130 | Not Available | + | 898653 - 899450 | 28873.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.