Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribulose-5-phosphate 4-epimerase | SHLA_121c000040 | Not Available | - | 875483 - 876121 | 22799.5 |
| hypothetical protein | SHLA_121c000050 | Not Available | - | 876118 - 877389 | 43177.8 |
| asp/glu/hydantoin racemase | SHLA_121c000060 | Not Available | - | 877411 - 878076 | 23509.3 |
| abc-type spermidine/putrescine transport systematpase component | SHLA_121c000070 | Not Available | - | 878119 - 879195 | 39186.2 |
| hypothetical protein | SHLA_184c000020 | Not Available | - | 881278 - 881583 | 11462.6 |
| phage major capsid protein, hk97 family | SHLA_142c000010 | Not Available | - | 881908 - 883149 | 44171.3 |
| prohead peptidase | SHLA_142c000020 | Not Available | - | 883227 - 883784 | 20640.1 |
| hypothetical protein | SHLA_142c000030 | Not Available | - | 883910 - 884218 | 10610.1 |
| hypothetical protein | SHLA_23c000020 | Not Available | - | 888764 - 889075 | 11283.3 |
| hypothetical protein | SHLA_23c000030 | Not Available | - | 889172 - 889579 | 14745.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.