Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucine-responsive regulatory protein lrp | SHLA_36c000720 | Not Available | + | 859928 - 860386 | 17387.0 |
| c4-dicarboxylate transport protein dcta | SHLA_36c000730 | Not Available | - | 860437 - 861768 | 46457.1 |
| c4-dicarboxylate transport sensor protein dctb | SHLA_36c000740 | Not Available | + | 861993 - 863792 | 65189.4 |
| c4-dicarboxylate transport transcriptional regulatory protein dctd | SHLA_36c000750 | Not Available | + | 863789 - 865168 | 50731.0 |
| 3-demethylubiquinone-9 3-methyltransferase | SHLA_36c000760 | Not Available | + | 865411 - 865857 | 16413.6 |
| aminomethyltransferase gcvt | SHLA_36c000770 | Not Available | - | 865958 - 868408 | 88383.5 |
| glycerol-3-phosphate regulon repressor | SHLA_36c000780 | Not Available | - | 868497 - 869297 | 28650.5 |
| hth-type transcriptional regulator cdhr | SHLA_36c000790 | Not Available | + | 869470 - 870507 | 38296.3 |
| glucose 1-dehydrogenase | SHLA_121c000020 | Not Available | + | 874443 - 875198 | 26198.2 |
| hypothetical protein | SHLA_121c000030 | Not Available | + | 875167 - 875370 | 7053.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.