Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | SHLA_36c000620 | Not Available | - | 850478 - 851431 | 35163.2 |
| non-heme chloroperoxidase cpo | SHLA_36c000630 | Not Available | + | 851562 - 852389 | 30672.1 |
| dehydrogenase | SHLA_36c000640 | Not Available | + | 852471 - 853259 | 27127.0 |
| hypothetical protein | SHLA_36c000650 | Not Available | - | 853359 - 853994 | 22250.2 |
| rna polymerase ecf-type sigma 70 factor | SHLA_36c000660 | Not Available | - | 853996 - 854613 | 23132.6 |
| glycine betaine/l-proline transport atp-binding protein prov | SHLA_36c000670 | Not Available | + | 855092 - 856324 | 44408.4 |
| glycine betaine/l-proline transport system permease protein prow | SHLA_36c000680 | Not Available | + | 856348 - 857232 | 30858.8 |
| glycine betaine-binding protein opuac | SHLA_36c000690 | Not Available | + | 857289 - 858164 | 32003.3 |
| putative transcriptional regulator | SHLA_36c000700 | Not Available | + | 858241 - 858513 | 9722.47 |
| methionine gamma-lyase mdea | SHLA_36c000710 | Not Available | - | 858519 - 859802 | 45573.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.