Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | SHLA_36c000520 | Not Available | + | 838440 - 839738 | 48073.2 |
| nosx accesory protein nosx | SHLA_36c000530 | Not Available | - | 839784 - 840761 | 34773.7 |
| putative lipoprotein involved in nitrous oxide reduction | SHLA_36c000540 | Not Available | - | 840758 - 841291 | 19042.4 |
| membrane protein nosy | SHLA_36c000550 | Not Available | - | 841288 - 842103 | 27610.7 |
| copper transport atp-binding protein nosf | SHLA_36c000560 | Not Available | - | 842100 - 843002 | 32408.2 |
| copper-binding periplasmic protein nosd | SHLA_36c000570 | Not Available | - | 843008 - 844339 | 47355.8 |
| nitrous-oxide reductase nosz | SHLA_36c000580 | Not Available | - | 844374 - 846287 | 70554.6 |
| regulatory protein nosr | SHLA_36c000590 | Not Available | - | 846310 - 848601 | 84688.0 |
| hypothetical protein | SHLA_36c000600 | Not Available | + | 848732 - 849586 | 31039.6 |
| iron-sulfur cluster repair di-iron protein | SHLA_36c000610 | Not Available | - | 849709 - 850374 | 24247.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.