Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase | SHLA_36c000420 | Not Available | + | 829020 - 830051 | 36583.6 |
| putative xylose isomerase domain-containing protein | SHLA_36c000430 | Not Available | + | 830048 - 830932 | 32473.9 |
| hippurate hydrolase hipo | SHLA_36c000440 | Not Available | + | 831051 - 832220 | 41197.2 |
| ornithine cyclodeaminase 1 | SHLA_36c000450 | Not Available | + | 832456 - 833430 | 33803.6 |
| lysine-arginine-ornithine-binding periplasmic protein argt | SHLA_36c000460 | Not Available | + | 833479 - 834261 | 27616.8 |
| amine acid abc transporter, permease protein his/glu/gln/arg/opine family | SHLA_36c000470 | Not Available | + | 834319 - 834984 | 23327.2 |
| amine acid abc transporter, permease protein his/glu/gln/arg/opine family | SHLA_36c000480 | Not Available | + | 834990 - 835727 | 26042.6 |
| amino acid abc transporter atp-binding protein, paat family | SHLA_36c000490 | Not Available | + | 835724 - 836455 | 26754.7 |
| l-threonine dehydratase biosynthetic ilva | SHLA_36c000500 | Not Available | + | 836470 - 837435 | 33364.1 |
| hypothetical protein | SHLA_36c000510 | Not Available | - | 837497 - 838141 | 23938.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.