Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | SHLA_36c000320 | Not Available | - | 816374 - 818020 | 59442.9 |
| choline dehydrogenase | SHLA_36c000330 | Not Available | - | 818017 - 819522 | 54140.2 |
| trehalose import atp-binding protein sugc | SHLA_36c000340 | Not Available | - | 819533 - 820633 | 39704.2 |
| putative sugar abc transporter, permease protein | SHLA_36c000350 | Not Available | - | 820638 - 821513 | 31345.1 |
| putative sugar abc transporter, permease protein | SHLA_36c000360 | Not Available | - | 821506 - 822399 | 32524.5 |
| putative sugar-binding periplasmic protein | SHLA_36c000370 | Not Available | - | 822467 - 823714 | 45101.9 |
| histidinol dehydrogenase 2 | SHLA_36c000380 | Not Available | - | 823777 - 825090 | 47131.5 |
| putative acetolactate synthase large subunit | SHLA_36c000390 | Not Available | - | 825183 - 826985 | 64315.7 |
| hypothetical protein | SHLA_36c000400 | Not Available | + | 827361 - 828050 | 26042.8 |
| hypothetical protein | SHLA_36c000410 | Not Available | - | 828061 - 828885 | 31395.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.