Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase/reductase sdr | SHLA_36c000120 | Not Available | + | 798051 - 798818 | 27029.6 |
| transcriptional regulator, arac family | SHLA_36c000130 | Not Available | - | 798805 - 799848 | 39224.2 |
| xylose isomerase protein | SHLA_36c000140 | Not Available | + | 800008 - 800874 | 31642.8 |
| putative epimerase | SHLA_36c000150 | Not Available | + | 800882 - 801730 | 31093.0 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SHLA_36c000160 | Not Available | + | 801727 - 803241 | 53802.4 |
| monosaccharide abc transporter membrane protein, cut2 family | SHLA_36c000170 | Not Available | + | 803238 - 804218 | 33584.3 |
| monosaccharide abc transporter membrane protein, cut2 family | SHLA_36c000180 | Not Available | + | 804215 - 805207 | 34512.3 |
| putative abc transporter, periplasmic solute-binding protein | SHLA_36c000190 | Not Available | + | 805269 - 806393 | 40439.2 |
| transcriptional regulator lysr family | SHLA_36c000200 | Not Available | + | 806567 - 807463 | 32084.9 |
| hypothetical protein | SHLA_36c000210 | Not Available | - | 807467 - 807775 | 11575.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.