Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. DD12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. DD12
Accession NumberAYLZ00000000.2
Gene Summary
Adenine Count
1407629 bp
Thymine Count
1405590 bp
Guanine Count
2434616 bp
Cytosine Count
2435418 bp
Genome Length
7683253 bp
Protein-coding Genes
7209 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase e1 component acee | SHLA_36c000020 | Not Available | - | 785353 - 787728 | 86644.8 |
| transcriptional regulator | SHLA_36c000030 | Not Available | + | 787861 - 788355 | 17860.8 |
| gntr domain-containing protein | SHLA_36c000040 | Not Available | - | 788380 - 789108 | 26787.8 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SHLA_36c000050 | Not Available | + | 789319 - 790683 | 48095.1 |
| abc-type sugar transport system permease component | SHLA_36c000060 | Not Available | + | 790745 - 791650 | 33211.5 |
| sugar/sn-glycerol-3-phosphate abc transporter permease ugpe | SHLA_36c000070 | Not Available | + | 791647 - 792465 | 30539.2 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | SHLA_36c000080 | Not Available | + | 792467 - 793531 | 38153.1 |
| choline dehydrogenase beta | SHLA_36c000090 | Not Available | + | 793528 - 796254 | 98897.7 |
| dihydrodipicolinate synthetase | SHLA_36c000100 | Not Available | + | 796251 - 797159 | 31944.6 |
| hypothetical protein | SHLA_36c000110 | Not Available | + | 797156 - 798049 | 32002.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.