Corynebacterium lactis RW2-5

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Corynebacteriaceae

Genus

Corynebacterium

Description

Corynebacterium lactis RW2-5 is a Gram-positive, non-spore-forming rod-shaped bacterium. This species is characterized by its distinct morphology and staining properties, which align with the traits commonly observed in the genus Corynebacterium. The Gram-positive nature indicates that the bacterium possesses a thick peptidoglycan layer in its cell wall, which is typical for this group and can influence its environmental resilience and interactions with other microorganisms. Corynebacterium lactis RW2-5 may play a role in specific ecological niches, particularly in dairy environments, given its association with lactate metabolism. While the strain is not known to form spores, its rod shape suggests potential adaptability in various nutrient-rich substrates, where it may contribute to microbial consortia. Understanding the metabolic capabilities and interactions of C. lactis RW2-5 could provide insights into its function within microbial communities, particularly in fermentation processes involving lactic acid bacteria. The unique combination of traits in C. lactis RW2-5 suggests its potential utility in biotechnological applications, particularly in dairy fermentation and possibly in the development of probiotic formulations. Further research into its metabolic pathways and interactions with other microorganisms could elucidate its role in specific fermentation environments, enhancing our understanding of its ecological significance.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyCorynebacteriaceae
GenusCorynebacterium
SpeciesCorynebacterium lactis
StrainRW2-5

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corynebacterium lactis RW2-5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corynebacterium lactis RW2-5


Gene Summary

Adenine Count

547873 bp

Thymine Count

545351 bp

Guanine Count

837533 bp

Cytosine Count

838988 bp

Genome Length

2769745 bp

Protein-coding Genes

2375 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Dna helicaseCLAC_RS12905Q9T1Q7+774296 - 77475116403.4
hypothetical proteinCLAC_RS03310Not Available+774748 - 7749276794.17
helix-turn-helix domain-containing proteinCLAC_RS03315Not Available+774928 - 77552721981.1
hypothetical proteinCLAC_RS03320Not Available+775559 - 77643732041.3
Hypothetical proteinCLAC_RS03325Not Available+777150 - 77747912481.0
Gp22CLAC_RS03330Not Available+777497 - 77906558290.3
Portal proteinCLAC_RS12910Not Available+779062 - 77957718846.2
Portal proteinCLAC_RS03335Not Available+779474 - 78044535641.8
Capsid maturation proteaseCLAC_RS03340Not Available+780572 - 78187647831.3
hypothetical proteinCLAC_RS03345Not Available+781889 - 78218810545.5

Displaying genes 1 – 10 of 2493 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

215 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da

Displaying 1–10 of 215 metabolites