Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia sp. SK013 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia sp. SK013
Accession NumberLAJH00000000.1
Gene Summary
Adenine Count
863690 bp
Thymine Count
868777 bp
Guanine Count
1170566 bp
Cytosine Count
1146775 bp
Genome Length
4049808 bp
Protein-coding Genes
3968 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | shim_39930 | Not Available | + | 4016945 - 4017424 | 17246.7 |
| daunorubicin/doxorubicin resistance atp-binding protein drra | shim_39940 | Not Available | - | 4017690 - 4018628 | 33926.0 |
| zinc-finger domain protein | shim_39950 | Not Available | + | 4018731 - 4018910 | 6627.76 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | shim_39960 | Not Available | - | 4019027 - 4019686 | 24800.2 |
| allantoate amidohydrolase | shim_39970 | Q9F464 | + | 4019860 - 4021059 | 42556.4 |
| wgr domain protein | shim_39980 | Not Available | - | 4021056 - 4021283 | 8747.56 |
| hypothetical protein | shim_39990 | Not Available | - | 4021354 - 4021635 | 9677.46 |
| hth-type transcriptional regulator dmlr | shim_40000 | Not Available | + | 4021688 - 4022608 | 33787.2 |
| mapeg family protein | shim_40010 | Not Available | - | 4022724 - 4023122 | 14136.8 |
| aerobic respiration control protein arca | shim_40020 | Q9HUI2 | - | 4023270 - 4023980 | 26414.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.