Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia sp. SK013 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia sp. SK013
Accession NumberLAJH00000000.1
Gene Summary
Adenine Count
863690 bp
Thymine Count
868777 bp
Guanine Count
1170566 bp
Cytosine Count
1146775 bp
Genome Length
4049808 bp
Protein-coding Genes
3968 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Beta-ketoacyl-acp synthase i | shim_11140 | P56902 | - | 1109931 - 1111190 | 44186.4 |
| 16s ribosomal rna | Not Available | Not Available | + | 483 - 1935 | Not Available |
| hypothetical protein | shim_00010 | Not Available | - | 344 - 658 | 11712.0 |
| hypothetical protein | shim_00020 | Not Available | - | 660 - 2135 | 53449.7 |
| hypothetical protein | shim_00030 | Not Available | - | 2172 - 2264 | 3202.04 |
| hypothetical protein | shim_00040 | Not Available | + | 2506 - 3219 | 27419.5 |
| 23s ribosomal rna | Not Available | Not Available | + | 2889 - 5716 | Not Available |
| hypothetical protein | shim_00050 | Not Available | - | 3510 - 3983 | 17716.3 |
| phage related protein | shim_00060 | Not Available | - | 4341 - 4805 | 17491.0 |
| hypothetical protein | shim_00070 | Not Available | - | 4907 - 5200 | 11093.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.