Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia sp. SK013 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia sp. SK013
Accession NumberLAJH00000000.1
Gene Summary
Adenine Count
863690 bp
Thymine Count
868777 bp
Guanine Count
1170566 bp
Cytosine Count
1146775 bp
Genome Length
4049808 bp
Protein-coding Genes
3968 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative cobalt transporter subunit (cbtb) | shim_01270 | Not Available | - | 118050 - 118220 | 5896.13 |
| chromosome partition protein smc | shim_01280 | A3PMS2 | + | 118695 - 122150 | 127087.0 |
| hypothetical protein | shim_01290 | Not Available | + | 122223 - 122573 | 12760.8 |
| membrane-bound lytic murein transglycosylase b precursor | shim_01300 | Not Available | - | 122577 - 123746 | 42593.0 |
| cobalamin biosynthesis protein cbib | shim_01310 | Q1GDE9 | - | 123807 - 124715 | 32313.4 |
| threonine-phosphate decarboxylase | shim_01320 | P21633 | - | 124712 - 125671 | 34202.5 |
| hypothetical protein | shim_01330 | Not Available | + | 125845 - 126240 | 14059.8 |
| glutathionyl-hydroquinone reductase yqjg | shim_01340 | P42620 | - | 126259 - 127233 | 37018.1 |
| hypothetical protein | shim_01350 | Not Available | + | 127438 - 127791 | 13240.8 |
| hypothetical protein | shim_01360 | Not Available | - | 127939 - 128223 | 10834.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.