Xenorhabdus nematophila F1

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Xenorhabdus nematophila F1 is a Gram-negative, rod-shaped bacterium characterized as a facultative anaerobe and is nonsporulating. This microbe is typically found in host-associated environments, suggesting a close association with nematodes, which serves as its primary ecological niche. The ability to thrive in both aerobic and anaerobic conditions indicates a versatile metabolic capacity, allowing it to adapt to varying oxygen levels within its host environment. Xenorhabdus nematophila F1 plays a significant role in the life cycle of its nematode hosts, often providing them with essential nutrients and contributing to their overall fitness. The bacterium's habitat within the host underscores its potential roles in symbiosis, nutrient cycling, and possibly in the defense against competing microbial species. The interactions between Xenorhabdus nematophila and its nematode partners highlight a complex biological relationship that may influence the dynamics of soil ecosystems. This bacterium exemplifies how host-associated microbes can have profound implications for both the health of their hosts and the broader ecological systems in which they reside. Further exploration of its metabolic pathways and interactions may reveal additional insights into its ecological significance and potential applications in biocontrol or sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus nematophila
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xenorhabdus nematophila F1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus nematophila F1


Gene Summary

Adenine Count

1191298 bp

Thymine Count

1184737 bp

Guanine Count

916098 bp

Cytosine Count

923543 bp

Genome Length

4215676 bp

Protein-coding Genes

3890 genes

Non-Coding Genes

280 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative dna methylaseXNC3_1220001Not Available-282223 - 28332042806.1
AttlNot AvailableNot Available+282695 - 282708Not Available
hypothetical proteinXNC3_1220002Not Available-283683 - 2838476449.97
P5XNC3_1220003Not Available-283841 - 28423314597.6
Hypothetical proteinXNC3_1220004Not Available-284632 - 28695389113.9
Prophage anti-repressorXNC3_1220005Not Available-286957 - 2871727722.37
Repressor protein ciXNC3_1220006Not Available+287313 - 28794223353.9
hypothetical proteinXNC3_1220007Not Available-288139 - 2882584315.33
CiXNC3_1220008Not Available+288582 - 28903717111.8
hypothetical proteinXNC3_1220009Not Available+289155 - 2892774741.73

Displaying genes 1 – 10 of 2901 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites