Clavibacter seminis

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Clavibacter

Description

Clavibacter seminis is a Gram-positive, rod-shaped bacterium that typically exists in pairs or as single cells. This microbe thrives in a variety of habitats, reflecting its adaptability to different environmental conditions. C. seminis is classified as an aerobic organism, indicating that it requires oxygen for its metabolic processes. The optimal growth temperature for this bacterium is approximately 25.0°C, suggesting that it may be well-suited to moderate climatic conditions. While specific ecological roles or associations of C. seminis are not detailed in the available data, its presence in diverse habitats may imply interactions with various plant or soil microbiomes. The ability of this organism to form pairs could suggest a degree of cooperative behavior or communication, which is often observed among bacteria in similar genera. Further investigation into its ecological niche could reveal insights into its potential roles in nutrient cycling or interactions with other microorganisms.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusClavibacter
SpeciesClavibacter michiganensis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Clavibacter seminis
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clavibacter seminis


Gene Summary

Adenine Count

479108 bp

Thymine Count

477914 bp

Guanine Count

1233147 bp

Cytosine Count

1230584 bp

Genome Length

3420753 bp

Protein-coding Genes

3136 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Rna polymerase sigma-70 factorW824_09410Not Available-1926589 - 192717922055.2
dna-directed rna polymerase subunit betaW824_09415Not Available-1927748 - 192838022504.7
Trna,type:lys,anti_codon:ttt;Not AvailableNot Available+1928479 - 1928554Not Available
AttlNot AvailableNot Available+1928510 - 1928526Not Available
Hypothetical proteinW824_09425Not Available-1928825 - 192915411484.2
hypothetical proteinW824_09430Not Available-1929461 - 192973010088.9
Hypothetical proteinW824_09435Not Available-1929988 - 193069526073.5
hypothetical proteinW824_09440Not Available+1930732 - 19308634673.54
Tail-associated lysinW824_09445Not Available-1930971 - 193178028640.3
hypothetical proteinW824_09450Not Available-1932248 - 19324999763.53

Displaying genes 1 – 10 of 3199 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites